BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C12SP1|AL429374
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1517 1700 0.0
3x_Contig38 336 4e-92
>3x_Contig1517
Length = 8289
Score = 1700 bits (854), Expect = 0.0
Identities = 894/904 (98%), Gaps = 5/904 (0%)
Strand = Plus / Plus
Query: 1 atgtttgthaattcacccgttaagaaagtttcgtagatgaagctgatactacaggtactg 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5082 atgtttgtaaattcacccgttaagaaagtttcgtagatgaagctgatactacaggtactg 5141
Query: 61 gttatctttttcttgttagatatctcttgatcgagccttcaatattgcctttaatatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5142 gttatctttttcttgttagatatctcttgatcgagccttcaatattgcctttaatatgct 5201
Query: 121 ttttttcttttgtttcttctaagagatatgtatttgatcttcttcataattaagggtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5202 ttttttcttttgtttcttctaagagatatgtatttgatcttcttcataattaagggtttc 5261
Query: 181 gaatgtctttttcatactgaaacatttagttcacagcaacttggtttacttcaacaacgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5262 gaatgtctttttcatactgaaacatttagttcacagcaacttggtttacttcaacaacgt 5321
Query: 241 tataagamaaagtttatgatttctatcactgcmagcttgtgaatcatctttggacctgct 300
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5322 tataagaaaaagtttatgatttctatcactgcaagcttgtgaatcatctttggacctgct 5381
Query: 301 catgtatggcaattgagctatgttccatactcccccattttctaatgcttctttcgatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5382 catgtatggcaattgagctatgttccatactcccccattttctaatgcttctttcgatac 5441
Query: 361 taaacaatccatcactgaatcttatcgcgatagtttgaattcgacgatttccaataatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5442 taaacaatccatcactgaatcttatcgcgatagtttgaattcgacgatttccaataatag 5501
Query: 421 cgatgcaaagaaaccgaatgtcatgcttcaaactgccagcacatcggcacctccatcacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5502 cgatgcaaagaaaccgaatgtcatgcttcaaactgccagcacatcggcacctccatcacc 5561
Query: 481 agaactaccaatagaatcttcagaatccaatgatgatttgattcccattgctagtatacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5562 agaactaccaatagaatcttcagaatccaatgatgatttgattcccattgctagtatacc 5621
Query: 541 tgatgaattgatgaaattgattgatttgttcattgatgatttgaaacagcctaaatattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5622 tgatgaattgatgaaattgattgatttgttcattgatgatttgaaacagcctaaatattc 5681
Query: 601 caggcctttaatgattacacaattatctcagatattccaaaggttttatgagagatttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5682 caggcctttaatgattacacaattatctcagatattccaaaggttttatgagagatttga 5741
Query: 661 tagatcttgccaacaacattttaatgcattagcctcgcctggaagtgtgaatgttatgct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5742 tagatcttgccaacaacattttaatgcattagcctcgcctggaagtgtgaatgttatgct 5801
Query: 721 caacgcgagagaaacgagaaatagtggattgagtagtatcttcaacagatccagaagtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5802 caacgcgagagaaacgagaaatagtggattgagtagtatcttcaacagatccagaagtag 5861
Query: 781 tagttttcgaaatagcagcataagaacaagaactagaactaattctgaacagaattatca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5862 tagttttcgaaatagcagcataagaacaagaactagaactaattctgaacagaattatca 5921
Query: 841 gcaattgttgact-cmgaagaaatat-ccatcaaa-twagctgc-agaggct-ataatat 895
||||||||||||| | |||||||||| |||||||| | |||||| ||||||| |||||||
Sbjct: 5922 gcaattgttgactccagaagaaatatcccatcaaattaagctgcaagaggctaataatat 5981
Query: 896 caaa 899
||||
Sbjct: 5982 caaa 5985
>3x_Contig38
Length = 925
Score = 336 bits (169), Expect = 4e-92
Identities = 191/199 (95%)
Strand = Plus / Plus
Query: 74 tgttagatatctcttgatcgagccttcaatattgcctttaatatgctttttttcttttgt 133
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 618 tgttagatatctcttgaacgagccttcaatattgcctttaatatgcttttcttcttttgt 677
Query: 134 ttcttctaagagatatgtatttgatcttcttcataattaagggtttcgaatgtctttttc 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttcttctaagagatatgtatttgatcttcttcataattaagggtttcgaatgtctttttc 737
Query: 194 atactgaaacatttagttcacagcaacttggtttacttcaacaacgttataagamaaagt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 738 atactgaaacatttagttcacagcaacttggtttacttcaacaacgttataagtctaatt 797
Query: 254 ttatgatttctatcactgc 272
|||| |||||||||||||
Sbjct: 798 ttattttttctatcactgc 816
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9021
Number of Sequences: 1807
Number of extensions: 9021
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 2
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)